To support systematic analysis of the data from ORGANISMS, we provide the following three download files:
All three files are tab-delimited. The mentions file has two columns, the first being an NCBI Taxonomy identifier and the second being a list of associated PubMed identifiers. The two other files have the following columns: NCBI Taxonomy identifier, taxon name, disease/tissue identifier, disease/tissue name, z-score, confidence score, and a URL to viewer of the underlying abstracts.